Package: Saint Petersberg Algorithmic Biology Lab
Saint Petersberg Algorithmic Biology Lab - Genome and transcriptome assembly
Documentation
Web site
https://ablab.github.io/spades/
Data
Platform
:
Installation
:
BIRCH
Programs
:
dipspades - assembler for highly polymorphic diploid genomes
quast - Evaluate genome assemblies
rnaspades - SPAdes Transcriptome Assembly
spades - Genome assembler
truspades - assembler for short reads produced by Illumina TruSeq Long Read technology